org.jgrapht.alg

Class BronKerboschCliqueFinder<V,E>

java.lang.Object

org.jgrapht.alg.BronKerboschCliqueFinder<V,E>

public class BronKerboschCliqueFinder<V,E>
extends Object

This class implements Bron-Kerbosch clique detection algorithm as it is described in [Samudrala R.,Moult J.:A Graph-theoretic Algorithm for comparative Modeling of Protein Structure; J.Mol. Biol. (1998); vol 279; pp. 287-302]

Author:

Ewgenij Proschak

Constructor Summary

Constructors

Constructor and Description
BronKerboschCliqueFinder(Graph<V,E> graph) Creates a new clique finder.

Method Summary

Methods

Modifier and Type	Method and Description
Collection<Set<V>>	getAllMaximalCliques() Finds all maximal cliques of the graph.
Collection<Set<V>>	getBiggestMaximalCliques() Finds the biggest maximal cliques of the graph.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

BronKerboschCliqueFinder

public BronKerboschCliqueFinder(Graph<V,E> graph)

Creates a new clique finder.

Parameters:

graph - the graph in which cliques are to be found; graph must be simple

Method Detail

getAllMaximalCliques

public Collection<Set<V>> getAllMaximalCliques()

Finds all maximal cliques of the graph. A clique is maximal if it is impossible to enlarge it by adding another vertex from the graph. Note that a maximal clique is not necessarily the biggest clique in the graph.

Returns:

Collection of cliques (each of which is represented as a Set of vertices)

getBiggestMaximalCliques

public Collection<Set<V>> getBiggestMaximalCliques()

Finds the biggest maximal cliques of the graph.

Returns:

Collection of cliques (each of which is represented as a Set of vertices)